Thursday 10 September |
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| 9:00am – 9:30am |
Registration and Coffee |
| 9:30am – 9:40am |
Welcome Address |
Jane Cope, PhD |
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Administrative Director
National Cancer Research Institute (NCRI), UK |
| 9:40am – 10:20am |
Opening Plenary - Progress Update |
| 9:40am – 10:00am |
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Ken Buetow, PhD |
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Associate Director, Bioinformatics and Information Technology; Director, Center for Biomedical Informatics and Information Technology (CBIIT) National Cancer Institute (NCI), USA |
| 10:00am – 10:20am |
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Sir Kenneth Calman, FRSE, PhD, BSc, FRCP, FRCS(Ed), FRCGP |
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Chair, National Cancer Research Institute |
| 10:20am – 12:30pm |
Implementation Challenges : ineroperability & integration |
| 10:20am – 10:40am |
Standards that influence Semantic Interoperability |
Brian Davis, PhD |
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VCDE Workspace Lead
caBIG® VCDE Workspace Lead National Cancer Institute (NCI), USA |
| 10:40am – 11:00am |
caDSR Evolution: A Semantic Infrastructure for Decentralized Collaboration and Research |
Denise B. Warzel, BBA |
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Associate Director, Core Infrastrure Program
Center for Biomedical Informatics and Information Technology (CBIIT)
National Cancer Institute (NCI), USA |
| 11:00pm – 11:15pm |
Break |
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| 11:15am – 11.35am |
Interoperability: Certification and Security |
Alan Hogg, PhD |
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Section Head - Platform Development, Informatics Initiative
National Cancer Research Insitute (NCRI), UK" |
| 11:35am – 12:10pm |
Towards ontology-driven querying and data integration of cancer-research data |
Alejandra Gonzalez-Beltran, PhD & |
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Research Associate
University College London, UK |
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Joshua Phillips |
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Vice President, Software Development and Engineering SemanticBits, USA |
| 12:10pm – 12:30pm |
Enterprise Architecture -- The CBIIT "Version 2" Strategy, Methodology, and Results |
Charles Mead, M.D., M.Sc. |
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Chief Technology Officer Center for Bioinformatics and Information Technology (CBIIT)
National Cancer Institute (NCI), USA |
| 12:30pm – 1:30pm |
Lunch |
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| 1:30 – 3:30pm |
Implementation Experiences |
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| 1:30pm – 2:00pm |
Title to be confirmed |
George Komatsoulis, PhD |
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Deputy Director Center for Biomedical Informatics and Information Technology (CBIIT) National Cancer Institute (NCI), USA |
| 2:00pm – 2:30pm |
Deployment of a data and information portal for cancer research – the NCRI ONIX experience |
Stuart Bell, PhD |
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Section Head, Community Alliances, Informatics Initiative
National Cancer Research Institute |
| 2:30pm – 3:00pm |
e-Infrastructure: an example of an implementation of interoperable infrastructure worldwide |
Maria Ramalho-Notario |
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Project Officer
Research infrastructures Unit, European Commision |
| 3:00pm – 3:30pm |
Production Grid Infrastructure in Europe: Current Practice and Future Plans |
Steven Newhouse, PhD |
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Technical Director, Enabling Grids for E-sciencE Project CERN |
| 3:30pm – 3:45pm |
Break and Poster Viewing |
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| 3:45pm – 4:15pm |
BioGrid Australia - 2003 to 2009
The Australian Implementation Experience & Opportunity |
Rob Merriel |
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Director
BioGrid Australia, Australia |
| 4:15pm - 4:45pm |
Transforming Cancer Control: Using Cyberinfrastructure to Support Population Science in Cancer |
Bradford W. Hesse, PhD |
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Chief Cancer Control and Population Sciences
National Cancer Institute (NCI), USA |
| 4:45pm - 5:30pm |
Panel Discussion |
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| 5:30pm – 7.30pm |
Opening Reception, with Technology Demonstrations and Poster Viewing |
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Friday, September 11 |
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| 7:30am – 8:30am |
Breakfast and Poster Viewing |
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| 8:30am – 9.30am |
Plenary - Implementing Personalised medicine through IT |
| 8:30am – 9.00am |
The ATHENA Breast Health Network: A Blueprint of Personalized Medicine |
Laura Esserman, MD, MBA |
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Director, Carol Franc Buck Breast Care Center; Professor of Surgery and Radiology; Director, Translational Informatics
University of California, San Francisco, USA |
| 9:00am – 9.30am |
Title to be confirmed |
Professor Sir Alex Markham, BSc, PhD, DSc, FRSC, CChem, MBBS, HonMD (Leeds), HonDMedSci (Manchester), HonDUniv (Stirling), FRCP, FRCPath, FMedSci. |
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Professor of Medicine
University of Leeds, UK |
| 9:30am – 9:45am |
Break |
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| 9:45am – 10:45am |
Concurrent Sessions |
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Track 1: Clinical and Translational Research |
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The Cancer Genome Atlas (TCGA) Data Portal |
Carl Schaefer, PhD |
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Director, Biomedical Informatics
Center for Bioinformatics and Information Technology (CBIIT) National Cancer Institute (NCI), USA |
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Organisation, integration and mining of complex cancer datasets |
Claude Chelala, PhD |
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Assistant Professor, Cancer Bioinformatics
Barts & The London School of Medicine (QMUL), UK |
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Open discussion |
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Track 2: Progress on Global Standards for Medical Research |
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Title to be confirmed |
Helen Parkinson, PhD |
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Production Coordinator, ArrayExpress EMBL European Bioinformatics Institute, UK |
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Building a Data Standards Foundation for Personalized Health Care |
Greg Downing, MD, PhD |
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Project Director, Personalised Healthcare Initiative Department of Health and Human Services, USA |
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Open discussion |
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| 10:45am – 11:00am |
Break |
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| 11:00am – 12:00pm |
Workshops |
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Workshop 1 - caBIG® Tools |
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Workshop 2 - Data Sharing: Research Culture, Funder Requirements, and Regulatory and Ethical Considerations |
| 12:00pm – 1:30pm |
Poster discussion session & Working lunch |
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| 1:30pm – 2:30pm |
Empowering the cancer community |
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Realising the value of existing data to maximise opportunities for the cancer research community |
Janet Valentine, PhD |
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Head of Partnership Initiatives
Medical Research Council (MRC), UK |
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Co-ordinating the Patient Voice in UK Cancer Research |
Dave Ardron |
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Chair, Consumer Liaison Group
National Cancer Research Institute, UK |
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A Survivor’s Perspective on Personalized Medicine |
Diane Paul |
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How International Collaboration and Technical Support Can Change the Future for Cancer Patients |
Patient Advocate National Cancer Institute (NCI), USA |
| 2:30pm – 2:45pm |
Break |
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| 2:45pm – 3:45pm |
New methods of communication and collaboration around research |
| 2:45pm – 3:10pm |
Exploring a collaborative informatics framework for translational research between two Breakthrough Breast Cancer Centers |
Anita Grigoriadis, PhD |
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Research Fellow, Breast Cancer Bioinformatics, Breakthrough Breast Research Unit, Guy’s Hospital / King’s College London, UK |
| 3:10pm – 3:30pm |
myExperiment: where work flows |
Carole Goble, PhD |
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Professor of Computer Science University of Manchester, UK |
| 3:30pm – 3:50pm |
Triple your Knowledge: from publishing papers to publishing Semantic Web statements |
Barend Mons, PhD |
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Associate Professor in Bio-Semantics University of Rotterdam, Netherlands |
| 3:50 – 4:00pm |
Closing and Announcement of Poster Prize Winners |
